a Tagkopoulos Lab
   
s
  Principal Investigator
 
Ilias Tagkopoulos

Principal Investigator
Ph.D. Princeton University, 2008

C.V.
Personal Webpage
  Postdoctoral Associates
 
Vadim Mozhayskiy

Postdoctoral Research Associate

Ph.D. University of Southern California, 2010

C.V.
 
Jiyeon Park

Postdoctoral Research Associate

Ph.D. University of Illinois at Urbanna-Champaign, 2011

C.V.
 
Semarhy Quinones-Soto

Postdoctoral Research Associate

Ph.D. University of California, Davis 2011

C.V.
  Graduate Students
 
Linh Viet Huynh

PhD Candidate, Computer Science

BS, Ho Chi Minh City University of Technology, 2008

C.V.
 
Eren Gultepe

PhD Candidate, Biomedical Engineering

BS, University of Washington at San Louis, 2008
MSc, University of Minessota, 2010

C.V.
  Undergraduates
 
Arlo Lobascio

BS candidate, Neurobiology, Physiology, and Behavior


C.V.
  Former members
 
Andreas Pavlogiannis (Patras *10), MS Candidate, Computer Science

Daniel Nicklas (UCLA *10), PhD Candidate, Biomedical Engineering

Mohammad Gharehyazie (Sharif *10), PhD Candidate, Computer Science

Dr. Martin Dragosits (BOCU *10), Postdoctoral associate, Genome Center

Adam Sumner (UCD *11), Undergraduate, Computer Science


Tagkopoulos Lab
Department of
Computer Science &
UC Davis Genome Center
University of California, Davis

Computer Science
Office: 3063 Kemper Hall
Tel: (530) 752-4821
Fax: (530) 752-4767
iliast at ucdavis.edu

Genome and Biomedical Sciences Facility
Office: 5313 GBSF
Tel: (530) 752-7707
Davis, CA 95616

News


NSF support: Our virtual ecology simulator is scheduled to run on the Blue Waters supercomputer in 2012.

Best paper award in Teragrid 2011: Our paper "A scalable multiscale framework for parallel simulation and visualization of microbial evolution" got two best paper awards in TG'11

Future of Science: Participated in the "Future of Science workshop, organized by the Institute for the Future for the Moore Foundation. For a beatiful roadmap depiction click here!

NSF Support: "A model-based system for the automated design of synthetic genetic circuits by mathematical optimization"

A multi-scale synthetic ecology simulator: The "Evolution in Variable Environments" (EVE) v2.1 simulator is now available!

IGEM awards: we got a gold medal and the best foundational advance award!

May 2012: The synthetic biology team was featured in the main UCD page. Here is the article